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#reproducibleresearch

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Adam H. Sparks :rstats:<p>Bonus points to Denis Shah and the rest of the authors for including example <a href="https://rstats.me/tags/RStats" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>RStats</span></a> code and data in the publication's materials. It helped greatly! <a href="https://rstats.me/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a></p>
Simon Tournier<p>Reproducible Crisis in Science?</p><p>Yes, we have a technological crisis!</p><p>A example?</p><p>Many results from biology rely on flow cytometry techniques. And Becton, Dickinson and Company (BD Biosciences) provides such instruments. They decide themselves based on financial criteria, e.g., maintenance or avaibility. Their instruments are fully proprietary. And we – scientific – have no control (power) on these instruments; cash cow end-user!</p><p><a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> and <a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> ask that such technology must be fully a Common Good – copyright and patent belonging to people, us, all.</p><p>You want to contribute in Science? Don’t work on yet another variant of variant already known result;</p><p>Instead be radical: Work on technology! Less personal reward in the short term; more collective reward in the long term.</p><p>When would we have open and free flow cytometry instruments?</p>
Simon Tournier<p>📣 Hey I’m very happy to attend <a href="https://social.sciences.re/tags/DebConf" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DebConf</span></a> this year in Brest! </p><p>What a schedule! <a href="https://debconf25.debconf.org/schedule/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">debconf25.debconf.org/schedule</span><span class="invisible">/</span></a> So nice, I cannot wait.</p><p>This year, there is an Academic track (schedule not yet released, IIUC)</p><p> <a href="https://www.diverse-team.fr/debconf25-academictrack" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">diverse-team.fr/debconf25-acad</span><span class="invisible">emictrack</span></a></p><p>Maybe « <a href="https://social.sciences.re/tags/Guix" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Guix</span></a>: From transparent and verifiable to long-term <a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a>? », who knows? Stay tuned! 😀</p><p><a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> <a href="https://social.sciences.re/tags/Debian" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Debian</span></a></p>
Ludovic Courtès<p>Yesterday <span class="h-card" translate="no"><a href="https://toot.aquilenet.fr/@rougier" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>rougier</span></a></span> and I gave an informal <a href="https://toot.aquilenet.fr/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> workshop at Inria with ~20 scientists, half of whom working in HPC, the rest of them working on user interfaces, computer graphics, number theory, and robotics—very insightful to see how each community approaches these issues.</p><p><span class="h-card" translate="no"><a href="https://toot.aquilenet.fr/@rougier" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>rougier</span></a></span> had excellent examples to get the discussion started. I followed up on computational reproducibility with <a href="https://toot.aquilenet.fr/tags/HPC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>HPC</span></a> examples and a touch of <a href="https://toot.aquilenet.fr/tags/Guix" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Guix</span></a> and <a href="https://toot.aquilenet.fr/tags/SoftwareHeritage" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SoftwareHeritage</span></a>:<br><a href="https://gitlab.inria.fr/lcourtes/atelier-recherche-reproductible" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">gitlab.inria.fr/lcourtes/ateli</span><span class="invisible">er-recherche-reproductible</span></a></p>
Adam H. Sparks :rstats:<p>Working through a data analysis on plant disease looking at weather's influence on the disease and recalled that some colleagues had done some interesting work in this area. Looked up the article and found that they had indeed included examples of <a href="https://rstats.me/tags/RStats" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>RStats</span></a> code! Hooray for <a href="https://rstats.me/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a>! </p><p><a href="https://doi.org/10.1094/PHYTO-11-17-0386-R" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">doi.org/10.1094/PHYTO-11-17-03</span><span class="invisible">86-R</span></a></p><p>cc <span class="h-card" translate="no"><a href="https://mstdn.science/@edelponte" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>edelponte</span></a></span></p>
galaxyproject<p>Keeping track of your analyses just got easier!</p><p>Galaxy now integrates with RSpace, allowing you to send datasets and histories directly to your electronic lab notebook. No more jumping between tools or losing track of results.</p><p>Learn more: <a href="https://galaxyproject.org/news/2025-06-23-rspace-integration/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">galaxyproject.org/news/2025-06</span><span class="invisible">-23-rspace-integration/</span></a></p><p><a href="https://mstdn.science/tags/GalaxyProject" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GalaxyProject</span></a> <a href="https://mstdn.science/tags/RSpace" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>RSpace</span></a> <a href="https://mstdn.science/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://mstdn.science/tags/FAIRdata" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>FAIRdata</span></a></p>
Simon Tournier<p>Blog post: What Guix could offer in computational medical environments?</p><p>French national agency for secure drug and medicine (ANSM) requires for a medical device to have unambiguous identifications:</p><p>1. reference of the product<br>2. reference of the maker<br>3. serial number</p><p>Well, through my lenses applied to software, it reads:</p><p>1. <a href="https://social.sciences.re/tags/SoftwareHeritage" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SoftwareHeritage</span></a> identifier (<a href="https://social.sciences.re/tags/SWHID" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SWHID</span></a>)<br>2. <a href="https://social.sciences.re/tags/Guix" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Guix</span></a></p><p>and 3. is redundant. 😁</p><p>Well, a quick summary of a 30min talk I gave past week.</p><p>Thanks my previous colleague Sam from APHP to give me the opportunity to brainstorm on this topic. 🤩</p><p><a href="https://simon.tournier.info/posts/2025-06-04-aphp-guix.html" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">simon.tournier.info/posts/2025</span><span class="invisible">-06-04-aphp-guix.html</span></a></p><p><a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> <a href="https://social.sciences.re/tags/Debian" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Debian</span></a> <a href="https://social.sciences.re/tags/ReproducibleBuilds" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleBuilds</span></a></p>
Center for Health Data Science<p>On-Demand Data Science Support for Researchers! 📊🧪<br>Got valuable data but no time for deep analysis? 🕒</p><p>The <a href="https://datasci.social/tags/SUNDDataLab" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SUNDDataLab</span></a> at the UCPH Center for Health Data Science (<a href="https://datasci.social/tags/HeaDS" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>HeaDS</span></a>) connects you with expert Data Scientists—on demand!</p><p>We offer help with <a href="https://datasci.social/tags/DataCleaning" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataCleaning</span></a>, <a href="https://datasci.social/tags/Visualization" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Visualization</span></a>, <a href="https://datasci.social/tags/Stats" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Stats</span></a>, and <a href="https://datasci.social/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a>.</p><p>🌐 <a href="https://www.heads.ku.dk/datalab/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="">heads.ku.dk/datalab/</span><span class="invisible"></span></a><br>📧 datalab@sund.ku.dk</p><p><a href="https://datasci.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Bioinformatics</span></a> <a href="https://datasci.social/tags/AcademicResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AcademicResearch</span></a> <a href="https://datasci.social/tags/DataScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataScience</span></a> <a href="https://datasci.social/tags/Collaboration" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Collaboration</span></a></p>
Christian Meesters<p>Did you know? During the <a href="https://fediscience.org/tags/SnakemakeHackathon2025" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SnakemakeHackathon2025</span></a> we had a staggering 194 work items!</p><p>It took a while, but now we are gathering contribution reports and present them online as a ResearchEquals (<a href="https://fediscience.org/@ResearchEquals@akademienl.social" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">fediscience.org/@ResearchEqual</span><span class="invisible">s@akademienl.social</span></a>) collection:</p><p><a href="https://www.researchequals.com/collections/hm1w-cg" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">researchequals.com/collections</span><span class="invisible">/hm1w-cg</span></a></p><p>The first 10 are online and I will post some highlights in the coming weeks.</p><p><a href="https://fediscience.org/tags/Snakemake" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Snakemake</span></a> <a href="https://fediscience.org/tags/ReproducibleComputing" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleComputing</span></a> <a href="https://fediscience.org/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://fediscience.org/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a></p>
Simon Tournier<p>Asking for news from a colleague now in Univ. of Tours – long time, no see.</p><p>Nicolas pointed me a recent publication where… guess what? … they archived the source code in <a href="https://social.sciences.re/tags/SoftwareHeritage" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SoftwareHeritage</span></a>.</p><p><a href="https://pubmed.ncbi.nlm.nih.gov/39487603/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">pubmed.ncbi.nlm.nih.gov/394876</span><span class="invisible">03/</span></a></p><p>Section « Open Research, data availability statement » reads:</p><p>« Anonymized raw data, the source code of the analyses, instructions to reproduce the computing environment, unformatted analysis reports and figures are available online (<a href="https://gitlab.com/nivall/car-lacates" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">gitlab.com/nivall/car-lacates</span><span class="invisible"></span></a>) and long term preserved at Software Heritage (<a href="https://archive.softwareheritage.org/swh:1:dir:a5c9b94421a6b5d6d0ab89e4aee752b540e7364f" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">archive.softwareheritage.org/s</span><span class="invisible">wh:1:dir:a5c9b94421a6b5d6d0ab89e4aee752b540e7364f</span></a>). »</p><p>And guess what else? The computational environment is managed using <a href="https://social.sciences.re/tags/Guix" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Guix</span></a>.</p><p>It makes my day! 😎</p><p>I’m happy to see <a href="https://social.sciences.re/tags/Guix" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Guix</span></a> and <a href="https://social.sciences.re/tags/SoftwarHeritage" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SoftwarHeritage</span></a> mentioned in the European Journal Of Clinical Investigation.</p><p><a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> <a href="https://social.sciences.re/tags/EuropeanJournalOfClinicalInvestigation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>EuropeanJournalOfClinicalInvestigation</span></a></p>
Simon Tournier<p>Hey “Choose Europe for Science”!</p><p>Do not only promote « public money, public code », make it an obligation!</p><p>Make an obligation that projects funded by Europe only rely on software that people all around the world are allowed to modify, distribute and make derivatives.</p><p>This would be a real measure which concretely claims: Science is a pillar for Democracy! There is no other Science than <a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a>.</p><p><a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://social.sciences.re/tags/ChooseEuropeForScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ChooseEuropeForScience</span></a> <a href="https://social.sciences.re/tags/FAIR" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>FAIR</span></a><br>3/3</p>
Simon Tournier<p>Yet another example.</p><p>This morning, a colleague of mine: Can you install <a href="https://mixcr.com/mixcr/about" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">mixcr.com/mixcr/about</span><span class="invisible"></span></a> ?</p><p>1. It’s far to be trivial to be able to audit/verify the correspondence between the source code and the distributed binary. Who trust who? <a href="https://github.com/milaboratory/mixcr" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">github.com/milaboratory/mixcr</span><span class="invisible"></span></a></p><p>2. It’s not based on the scientific principles! Because the LICENSE reads: « The User is not authorized by this License to modify, distribute or make derivatives of the Software. » <a href="https://github.com/milaboratory/mixcr/blob/1bbe28cf71bc294bcac2149c54d72f02467c28c9/LICENSE" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">github.com/milaboratory/mixcr/</span><span class="invisible">blob/1bbe28cf71bc294bcac2149c54d72f02467c28c9/LICENSE</span></a></p><p>About 1. ok that’s a difficult topic. It’s big and deep in our (technical) society.</p><p>About 2. hey it’s easy: « public money, public code ». Researchers paid by public money must only use free software (not gratis software!).</p><p><a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a><br>2/3</p>
Simon Tournier<p><a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> and <a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a>, are they really making concrete progress?</p><p>Aside a ridiculous small set of people trying to do their best, the other are well-informed and deeply aware but they just don’t care!</p><p>Many researchers and communities hide behind « we cannot do otherwise »… 🤔 If *you* – paid by public money with a permanent position in a public institute – cannot do otherwise, who can?!? Damned!</p><p>Somehow I’m tired… Back from holidays one week ago and I already feel empty. 🤯</p><p>1/3</p>
Wouter Grouve<p>Reading an interesting paper with experimental results, but find some of the findings conflicting. I went to check the data, only to find the data availability statement reads: "Data sharing is not applicable as no datasets were generated or analyzed." I mean, what!? How would you handle this? </p><p><span class="h-card" translate="no"><a href="https://a.gup.pe/u/academicchatter" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>academicchatter</span></a></span> <a href="https://social.edu.nl/tags/openscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openscience</span></a> <a href="https://social.edu.nl/tags/reproducibleresearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibleresearch</span></a></p>
Simon Tournier<p>« If open science is done transparently, it doesn’t have to be done perfectly. You can always refine as you go. »</p><p><a href="https://www.nature.com/articles/d41586-025-00944-0" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">nature.com/articles/d41586-025</span><span class="invisible">-00944-0</span></a></p><p><a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> <a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a></p>
Christian Meesters<p>Last year at the Open Science Retreat (<a href="https://fediscience.org/tags/OSR24NL" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OSR24NL</span></a>) I have been introduced to nanopubs by <span class="h-card" translate="no"><a href="https://social.edu.nl/@egonw" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>egonw</span></a></span> and created my first nanopub declaring citations for a paper using CiTOs (citation ontologies).</p><p>Now, travelling to <a href="https://fediscience.org/tags/OSR25CH" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OSR25CH</span></a>, due to issues with the train network foreseen with plenty of time, I used the opportunity and created a new one ( <a href="https://w3id.org/np/RAicq7k9QHX8EG8ho7Baib9GxHsU18O0tyFCZ4tbbGGPA" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">w3id.org/np/RAicq7k9QHX8EG8ho7</span><span class="invisible">Baib9GxHsU18O0tyFCZ4tbbGGPA</span></a> ) for my latest publication on teaching <a href="https://fediscience.org/tags/Snakemake" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Snakemake</span></a> on <a href="https://fediscience.org/tags/HPC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>HPC</span></a> systems.</p><p>The teaching material is — again — in desperate need of additions and overhaul, but that is for another day.</p><p><a href="https://fediscience.org/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> <a href="https://fediscience.org/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://fediscience.org/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://fediscience.org/tags/AcademicChatter" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AcademicChatter</span></a></p>
Ludovic Courtès<p>If you’re into <a href="https://toot.aquilenet.fr/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> &amp; <a href="https://toot.aquilenet.fr/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a>, don’t miss this MOOC 👇<br><a href="https://scholar.social/@khinsen/114314471616473600" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">scholar.social/@khinsen/114314</span><span class="invisible">471616473600</span></a></p><p>Lots of practical tools for computational reproducibility, including the unequaled <a href="https://toot.aquilenet.fr/tags/Guix" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Guix</span></a> :-), all this brought to you by experts in the field, starting with <span class="h-card" translate="no"><a href="https://scholar.social/@khinsen" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>khinsen</span></a></span>.</p>
Simon Tournier<p>Reading report 182 by Institute for replication:</p><p>« While demand estimates perfectly replicate, the production function estimates of Hong and Luparello (2024) differ slightly from those in Orr (2022) to the second decimal.</p><p>Hong and Luparello (2024) argue this due to numerical instability of STATA’s matrix inversion when recovering marginal cost, which I believe is correct.</p><p>The documentation for the particular command used for the marginal cost inversion — luinv in STATA — notes that different computers can give different results when a matrix is close to singular. »</p><p>Ok, now I would like to inspect the numerical method behind ’luinv’.</p><p>Doc reads « This function uses the MKL LAPACK by default. » … but for some cases Netlib LAPACK could also be used. Hum?!</p><p>🤔 Which LAPACK version? Compiled using which options? In other words, which computational environment?</p><p><a href="https://i4replication.org" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">i4replication.org</span><span class="invisible"></span></a><br><a href="https://www.stata.com/manuals/m-5luinv.pdf" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="">stata.com/manuals/m-5luinv.pdf</span><span class="invisible"></span></a></p><p><a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a></p>
Simon Tournier<p>Do you know Stata?</p><p>« a general-purpose statistical proprietary software package developed by StataCorp for data manipulation, visualization, statistics, and automated reporting. It is used by researchers in many fields, including biomedicine, economics, epidemiology, and sociology. »</p><p>Guess how much does it cost? $USD ~1000 per year! Option government/nonprofit single-user. Bang!</p><p>And guess what?</p><p>For this price, you have only the “fast“ option, not “twice as fast”, neither “almost four times as fast” or neither even “even faster”. Ahah!</p><p>Crazy to read we’re still there in 2025 about <a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> and <a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> in some academic fields…</p><p><a href="https://en.wikipedia.org/wiki/Stata" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">en.wikipedia.org/wiki/Stata</span><span class="invisible"></span></a><br><a href="https://www.stata.com/order/new/gov/single-user-licenses/dl/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">stata.com/order/new/gov/single</span><span class="invisible">-user-licenses/dl/</span></a></p>
Simon Tournier<p>Ce qui est toujours passionant aux journées du Réseau Français de la Recherche Reproductible, c’est l’inter-disciplinarité.</p><p>Hier aprês des ouvertures sur les pratiques éditoriales, des présentations autour de l’analyse d'images IRM et de la recherche pré-clinique. </p><p>Puis discussion avec un café et des pralines sur la géomatique avec <span class="h-card" translate="no"><a href="https://social.sciences.re/@NRoelandt" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>NRoelandt</span></a></span>.</p><p>Ce matin, une présentation sur la Science Ouverte en archéologie pré-historique puis ensuite une sur l’astrophysique.</p><p>Une belle stimulation par la pollinisation croisée.</p><p><a href="https://jrfrr-2025.sciencesconf.org/?lang=fr" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">jrfrr-2025.sciencesconf.org/?l</span><span class="invisible">ang=fr</span></a><br><a href="https://social.sciences.re/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://social.sciences.re/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a></p>