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#joss

0 Beiträge0 Beteiligte0 Beiträge heute
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Christian Meesters

I have been approach by an editor of #JOSS (fediscience.org/@joss@fosstodo) who told me about #JOSE (jose.theoj.org/ - for which I could not find a Mastodon handle).

The idea is to provide a low-hurdle academic reward to provide open access educational material -- with a particular computational emphasis.

Thing is, that you hardly get an academic “paper” if you develop teaching material. So, this might be appealing for some folk here. 😉

fediscience.orgFediScience.org
#Teaching#AcademicCareer#AcademiCChatter
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petersuber

The _Journal of Open Source Software_ (#JOSS, @joss) "is a fully diamond #OpenAccess journal with a cost of around US$5 per paper for the 401 papers published in 2023."

See how this works.
iastatedigitalpress.com/jlsc/a

Journal of Librarianship and Scholarly CommunicationThe Journal of Open Source Software (JOSS): Bringing Open-Source Software Practices to the Scholarly Publishing Community for Authors, Reviewers, Editors, and PublishersIntroduction: Open-source software (OSS) is a critical component of open science, but contributions to the OSS ecosystem are systematically undervalued in the current academic system. The Journal of Open Source Software (JOSS) contributes to addressing this by providing a venue (that is itself free, diamond open access, and all open-source, built in a layered structure using widely available elements/services of the scholarly publishing ecosystem) for publishing OSS, run in the style of OSS itself. A particularly distinctive element of JOSS is that it uses open peer review in a collaborative, iterative format, unlike most publishers. Additionally, all the components of the process—from the reviews to the papers to the software that is the subject of the papers to the software that the journal runs—are open. Background: We describe JOSS’s history and its peer review process using an editorial bot, and we present statistics gathered from JOSS’s public review history on GitHub showing an increasing number of peer reviewed papers each year. We discuss the new JOSSCast and use it as a data source to understand reasons why interviewed authors decided to publish in JOSS. Discussion and Outlook: JOSS’s process differs significantly from traditional journals, which has impeded JOSS’s inclusion in indexing services such as Web of Science. In turn, this discourages researchers within certain academic systems, such as Italy’s, which emphasize the importance of Web of Science and/or Scopus indexing for grant applications and promotions. JOSS is a fully diamond open-access journal with a cost of around US$5 per paper for the 401 papers published in 2023. The scalability of running JOSS with volunteers and financing JOSS with grants and donations is discussed.
#DiamondOA#OpenSource
Antwortete im Thread
Lskatz ☑

🚨 Just published in JOSS: Mashpit 🚨

A lightweight genomic epidemiology platform you can run on your laptop. ⚡ It's FAST, works offline after setup, and is perfect for labs with low resources or sensitive data. 🧬

Empowering epidemiology, everywhere. 🌍 #Genomics #OpenSource #JOSS

RoedigerRG

For the next few months, Dr. Andrej-Nikolai Spiess (openalex.org/works?page=1&filt) will be a guest in my working group.

We are working on a paper where we show that 29 % of papers in top journals like Science, Nature & PNAS were skewed by a single influential data point! Time to rethink our reliance on p-values and explore alternative measures like #dfstat. #reproducibilitycrisis #linearregression #rstats

Moreover, we will work on #qPCR related software like PCRedux (joss.theoj.org/papers/10.21105)

#JOSS
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jonny (good kind)

Call for @joss reviewers:

EdgeVPN.io
repo: github.com/EdgeVPNio/evio
pre-review: github.com/openjournals/joss-r
language: Python

Description:

EdgeVPN.io is an evolution of the IP-over-P2P (IPOP) project. IPOP started as an IP-based peer-to-peer overlay targeting personal devices, and over time the architecture evolved to adopt various standards, support centralized user/group management, and incorporate software-defined networking, culminating in the current architecture, tailored for research and development in nascent edge computing applications.
...
EdgeVPNio is a research project to build networking for the fog, spanning the network continuum from the cloud to its edge. It builds networking cyber-infrastructure which supports emerging IoT era applications.

Looks like this one might be a bit of fun for #p2p people, or i suppose #DistributedSystems people generally. No prior experience reviewing for JOSS is required, experience with Python is required, and some experience with the topic area is preferred. Don't be shy! If you've never done open review before, JOSS is a great place to start. It's a really good way to learn by teaching (or learn by reading!) in a collaborative context. You can reply here or on the pre-review issue to volunteer :)

edit: would love to have some infosec people on this one! even and especially if you are not in academia :)

GitHubGitHub - EdgeVPNio/evio: Virtualized overlay networking for the fog. The Evio network spans the continuum, from the cloud to the edge, providing a virtual private layer 2 network suitable for edge devices in IoT workloads.Virtualized overlay networking for the fog. The Evio network spans the continuum, from the cloud to the edge, providing a virtual private layer 2 network suitable for edge devices in IoT workloads....
#OpenReview#PeerReview#SoftwareReview
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Yann Büchau :nixos:

Here is a #JOSS paper about the main reusable thing from my #PhD: the :python: Python package PARMESAN 🧀 for meteorological turbulence and timeseries analysis:

doi.org/10.21105/joss.06127

PARMESAN integrates with #pandas, uses #sympy-based equations and handles units with pint.

I really like the approach of @joss: fully open infrastructure, automated workflows, everything feels really smooth. 👍

Journal of Open Source SoftwarePARMESAN: Meteorological Timeseries and Turbulence Analysis Backed by Symbolic MathematicsBüchau et al., (2024). PARMESAN: Meteorological Timeseries and Turbulence Analysis Backed by Symbolic Mathematics. Journal of Open Source Software, 9(94), 6127, https://doi.org/10.21105/joss.06127
#Python#meteorology#physics
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Marcel Stimberg

EDIT: I found somebody - many thanks for all the boosts!

Hi, I am looking for reviewers for the following submission to @joss:

“Φ-ML: A Science-oriented Math and Neural Network Library for Jax, PyTorch, TensorFlow & NumPy”

Repo: github.com/tum-pbs/PhiML
Paper: github.com/openjournals/joss-p
Pre-review: github.com/openjournals/joss-r

JOSS publishes articles about open source research software. It is a free, open-source, community driven and developer-friendly online journal. JOSS reviews involve downloading and installing the software, and inspecting the repository and submitted paper for key elements

Please reach out if you are interested in reviewing this paper or know one who could review this paper.

GitHubGitHub - tum-pbs/PhiML: Science-oriented math and neural network library for Jax, PyTorch, TensorFlow & NumPyScience-oriented math and neural network library for Jax, PyTorch, TensorFlow & NumPy - GitHub - tum-pbs/PhiML: Science-oriented math and neural network library for Jax, PyTorch, TensorFlow &am...
#review#JOSS#FOSS
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